Combining multiple SNPs in Mendelian randomization studies with continuous outcome

Publication type

Conference Paper

Series

Understanding Society Scientific Conference 2017, 11-13 July 2017, University of Essex, Colchester, UK

Author

Publication date

July 12, 2017

Summary:

Mendelian Randomization (MR) uses genetic variants as instrumental variables (IVs) to estimate the causal effects of modifiable exposures on outcomes. The core conditions required for a genetic variant to identify a causal effect are that it 1) is associated with the exposure, 2) has no direct pathway between it and the outcome, and 3) is not associated with any unobserved confounding variables. In practice, individual genetic variants are only weakly associated with exposures so that we would obtain biased estimates, even if the core conditions were satisfied. This has led researchers to consider the use of multiple genetic variants in their analyses. However, even here, the impact of pleiotropy, and other problems such as linkage disequilibrium and population stratification, can lead to bias through failure of core conditions 2) and 3). In this paper, we compare two recently developed methods, Egger regression and median regression, which are claimed to be robust to invalid IVs and which have been applied by other researchers. We also investigate the performance of another new method, sisVIVE, which has good theoretical properties but is much less widely used. We discuss the relative performance of these methods through simulation experiments and an application to estimate the causal effect of BMI on social outcomes using genetic data from Understanding Society.

Subjects

Link

https://www.understandingsociety.ac.uk/scientific-conference-2017/papers/107

#524346

News

Latest findings, new research

Publications search

Search all research by subject and author

Podcasts

Researchers discuss their findings and what they mean for society

Projects

Background and context, methods and data, aims and outputs

Events

Conferences, seminars and workshops

Survey methodology

Specialist research, practice and study

Taking the long view

ISER's annual report

Themes

Key research themes and areas of interest